Materials - RDM

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- Scientific topic
- Data visualisation
- Data management253
- Metadata management253
- Research data management (RDM)253
- Genome annotation224
- Exomes203
- Genomes203
- Genomics203
- Personal genomics203
- Synthetic genomics203
- Viral genomics203
- Whole genomes203
- FAIR data196
- Findable, accessible, interoperable, reusable data196
- Comparative transcriptomics187
- Transcriptome187
- Transcriptomics187
- R153
- R program153
- R script153
- Python138
- Python program138
- Python script138
- py138
- Bayesian methods135
- Biostatistics135
- Descriptive statistics135
- Gaussian processes135
- Inferential statistics135
- Markov processes135
- Multivariate statistics135
- Probabilistic graphical model135
- Probability135
- Statistics135
- Statistics and probability135
- MicroRNA sequencing126
- RNA sequencing126
- RNA-Seq126
- RNA-Seq analysis126
- Small RNA sequencing126
- Small RNA-Seq126
- Small-Seq126
- Transcriptome profiling126
- WTSS126
- Whole transcriptome shotgun sequencing126
- miRNA-seq126
- Algorithms124
- Computer programming124
- Data structures124
- Programming languages124
- Software development124
- Software engineering124
- Chromosome walking106
- Clone verification106
- DNA-Seq106
- DNase-Seq106
- High throughput sequencing106
- High-throughput sequencing106
- NGS106
- NGS data analysis106
- Next gen sequencing106
- Next generation sequencing106
- Panels106
- Primer walking106
- Sanger sequencing106
- Sequencing106
- Targeted next-generation sequencing panels106
- Active learning100
- Ensembl learning100
- Kernel methods100
- Knowledge representation100
- Machine learning100
- Neural networks100
- Recommender system100
- Reinforcement learning100
- Supervised learning100
- Unsupervised learning100
- Bioinformatics95
- Metagenomics81
- Shotgun metagenomics81
- Biodiversity73
- Data rendering68
- Bottom-up proteomics64
- Discovery proteomics64
- MS-based targeted proteomics64
- MS-based untargeted proteomics64
- Metaproteomics64
- Peptide identification64
- Protein and peptide identification64
- Proteomics64
- Quantitative proteomics64
- Targeted proteomics64
- Top-down proteomics64
- Single-cell genomics60
- Single-cell sequencing60
- Antimicrobial stewardship56
- Medical microbiology56
- Microbial genetics56
- Microbial physiology56
- Microbial surveillance56
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- Operation
- Data extraction1
- Data handling1
- Data retrieval1
- Data retrieval (metadata)1
- Data visualisation1
- Database retrieval1
- File handling1
- File processing1
- Metadata retrieval1
- Molecular visualisation1
- Ontology browsing1
- Ontology visualisation1
- Plotting1
- Processing1
- Query1
- Query and retrieval1
- Rendering1
- Report handling1
- Retrieval1
- Utility operation1
- Visualisation1
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- Tool
- Cytoscape1
- DISEASES1
- RStudio1
- STITCH1
- STRING1
- stringApp1
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- Standard database or policy
- STRING: functional protein association networks1
- Search Tool for Interactions of Chemicals1
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- Content provider
- Glittr.org44
- PaN Training8
- European Bioinformatics Institute (EBI)3
- SIB Swiss Institute of Bioinformatics3
- ELIXIR Estonia2
- Australian BioCommons1
- ELIXIR1
- NBIS1
- Novo Nordisk Foundation Center for Protein Research1
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- Keyword
- Data visualization52
- R34
- Python16
- Data science7
- Genomics7
- Statistics7
- Data visualisation6
- RNA-seq6
- General5
- Machine learning4
- Transcriptomics4
- Data Visualization3
- Data management3
- Online Repository3
- RStudio3
- Single-cell sequencing3
- Unix/Linux3
- Variant analysis3
- Version control3
- Workflows3
- ATAC-seq2
- Dashboard2
- Data Management2
- Data analysis2
- FAIR Data2
- Java2
- Reproducibility2
- Rmarkdown2
- Analysis1
- Automated testing1
- Bioinformatics1
- Business Inteligence1
- CONVERGE1
- Clinical data1
- Comparative genomics1
- Cryo-Electron Microscopy1
- Data mining1
- Enrichment analysis1
- Epigenetics1
- FAIR Data, Workflows, and Research1
- FAIR data1
- Genome annotation1
- Genome assembly1
- GraphDB1
- Health Services1
- Herpetology1
- Image analysis1
- Knowledge graph1
- Long read sequencing1
- Metagenomics1
- Mock data1
- Multiomics1
- Next generation sequencing1
- Nextflow1
- Open Access1
- Open Science1
- Open Source Software1
- Open source code1
- Pathways and Networks1
- Protein models1
- Python for Data Analysis1
- Quality Validation1
- R Programming1
- R software1
- RAP1
- RDF1
- Reproducible Analytical Pipeline1
- Reproducible Environment1
- Reproducible Research1
- Reproducible Science1
- SARS-CoV-21
- SPARQL1
- SimPy1
- Simulation1
- Snakemake1
- Spatial omics1
- Spatial transcriptomics1
- Structural biology1
- Tableau1
- Web Services (5596)1
- covid-191
- data annotation1
- data visualisation1
- data visualization1
- discrete-event simulation1
- electron microscopy1
- ggPlot1
- ggplot21
- multi-omics data integration1
- reproduce1
- reproducible research1
- simmer1
- transcriptomics1
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- Competency level
- Not specified54
- Intermediate8
- Beginner6
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- Licence
- License Not Specified34
- Creative Commons Attribution 4.0 International13
- MIT License10
- Creative Commons Attribution Share Alike 4.0 International4
- BSD 3-Clause "New" or "Revised" License2
- GNU General Public License v3.0 only2
- Apache License 2.01
- Creative Commons Attribution No Derivatives 2.0 Generic1
- Creative Commons Zero v1.0 Universal1
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- Target audience
- Scientific community3
- Students3
- Bioinformaticians2
- Data Managers2
- Data Scientists2
- Life scientists, bioinformaticians and researchers who are familiar with writing Python code and core Python elements, and would like to use it in their daily data exploration and visualization tasks.2
- Researcher2
- Researchers2
- Scientists2
- Analysts1
- Anyone wishing to interpret graphs showing the progression of COVID-19.1
- Biologists1
- Biomedical Researchers1
- Clinicians1
- Graduate Students1
- PI1
- PhD candidates1
- PhD students1
- PostDocs1
- Postdoctoral Researchers1
- Postgraduate students1
- Research Scientists1
- Research Software Engineers1
- Researcher in life sciences1
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- Author
- Donat Agosti3
- ELIXIR Estonia3
- Julia Giora3
- Plazi Verein3
- The Carpentries Incubator3
- posit-conf-20233
- Bioinformatics, Rockefeller University2
- C. Li2
- Diana Pilvar2
- Fred Hutch Data Science Lab2
- Kyran Dale2
- SIB Swiss Institute of Bioinformatics2
- Scott Reed2
- Teaching materials at the Harvard Chan Bioinformatics Core2
- UW Interactive Data Lab2
- Wandrille Duchemin2
- rstudio::conf(2022)2
- A. Solomon Kurz1
- Aditya Dahiya1
- Amy Heather1
- Ansell, Brendan1
- Barugahare, Adele1
- BioINForm1
- Bourke, Caitlin1
- Carson Sievert1
- Chandrananda, Dineika1
- Christian Burkhart1
- Chung, Jessica1
- Claus Wilke1
- Conradsen, Cara1
- Crowe, Mark1
- Ding, Ke1
- Doyle, Maria1
- Erik Hedman1
- Feher, Kristen1
- Freytag, Saskia1
- Genome Informatics Facility1
- Gustafsson, Johan1
- Hadley Wickham1
- Hands-On Data Visualization1
- Helen V. Cook1
- Iacono, Giulia1
- Joachim Goedhart1
- Jung, Chol-Hee1
- Kandhari, Nitika1
- Kristyna Kupkova1
- Lars Juhl Jensen1
- Ma, Mengyao1
- Markus Englund1
- Moffet, Joel1
- Monique Zahn1
- NBIS - National Bioinformatics Infrastructure Sweden1
- Nadezhda T. Doncheva1
- Nelson, Tiffanie1
- Nurlan Kerimov1
- Oscar Baruffa1
- PAIR code1
- Perlaza-Jimenez, Laura1
- Personalized Health Informatics Group1
- Petar Horki1
- Pinzon Perez, William1
- Priit Adler1
- R. Burke Squires1
- RStudio Education1
- Rohan Alexander1
- Rosello, Fernando1
- Sandoval, Claudia1
- Schreiber, Veronika1
- Sergio Martínez Cuesta1
- Stephen Turner1
- Tarasova, Ilariya1
- The McDonnell Genome Institute1
- Varshney, Akriti1
- Williams, Sarah1
- Winston Chang1
- Zhang, Eden1
- chemillusion.com1
- genomicsclass1
- gladstone-institutes1
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- Contributor
- Mine Cetinkaya-Rundel6
- Cédric Scherer3
- C. Li2
- Carson Sievert2
- Danielle Navarro2
- Deepak Tanwar2
- Eric Leung2
- Geert van Geest2
- Hadley Wickham2
- Jihe Liu2
- Jon Calder2
- Kyran Dale2
- Lluís Revilla2
- Matt Paul2
- Meeta Mistry2
- Mohit Sharma2
- Måns Thulin2
- Nurlan Kerimov2
- Pietro Monticone2
- Radhika Khetani2
- Scott Reed2
- Thomas Carroll2
- Will Beasley2
- Will Gammerdinger2
- hwick2
- marypiper2
- A. Solomon Kurz1
- Aaron Simumba1
- Abinash Satapathy1
- Adam Fleischhacker1
- Adam Pearce1
- Adejumo Ridwan Suleiman1
- Aditya Dahiya1
- Aleksandra E. Badaczewska-Dawid1
- Alex Trueman1
- Alexander Pico1
- Alexej Gossmann1
- Alison Harper1
- Alison Presmanes Hill1
- Amélie Julé1
- Anders Riutta1
- Andrew Severin1
- Andy Coenen1
- Anthony Biel1
- Arend M Kuyper1
- Arun Seetharam1
- Ayushi Agrawal1
- BRC @ Rockefeller University - Alt account1
- Ben Bolker1
- Ben Bond-Lamberty1
- Betul Turkoglu1
- Bjørn Peare Bartholdy1
- Bryan Shalloway1
- Chris Elrod1
- Chris Miller1
- Christian Burkhart1
- Christophe Dervieux1
- Christopher Bottoms1
- Claus Wilke1
- Clemens Schmid1
- Colin Fay1
- Dan Yavorsky1
- Daniel Gromer1
- Dave Childers1
- Dekkerb1
- Dennis Murphy1
- Dominik Moritz1
- E. David Aja1
- Elin Kronander1
- Elizabeth Partan1
- Emil Hvitfeldt1
- Ephantus Wambui1
- Ezekiel Adebayo Ogundepo1
- Fatemeh Alidoost1
- Federico Marini1
- Francisco Júnior1
- Fred Hutch Data Science Lab1
- Frédéric Schütz1
- GitBook Bot1
- Grace Lawley1
- Greg Wilson1
- Gökçen Eraslan1
- Halden Lin1
- Han Zhang1
- Hanne Oberman1
- Hiroaki Yutani1
- Hochia1
- Howard Baik1
- Ilya Ilyankou1
- Ilya Sytchev1
- Isabella Velásquez1
- Itto1
- Ivan Berest1
- Jack Dougherty1
- Jake Thompson1
- Jamene Brooks-Kieffer1
- Jamie Lendrum1
- Jannik Buhr1
- Jasmine Mithani1
- Jason Bixon1
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- Resource type
- e-learning6
- lessons6
- E-learning2
- Recorded webinar2
- Training materials2
- Book1
- Coding1
- Computer Science1
- Computer Software1
- Course materials1
- Data Science1
- Documentation1
- E-Learning1
- Education1
- Educational Resource1
- FREE online course1
- How-to guide1
- Jupyter notebook1
- Mock data1
- Online material1
- Open educational resource1
- Poster1
- Presentation1
- Programming1
- Tutorial1
- Video1
- case studies1
- course materials1
- e-Learning1
- educational materials1
- examples1
- handbook1
- hands-on tutorial1
- knowledgebase1
- online course1
- online modules1
- online tutorial1
- tutorial1
- tutorials1
- workflow1
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- Related resource
- Data Visualisation (theory) 1
- R basics1
- The Carpentries1
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- Node
- Switzerland47
- EMBL-EBI3
- Estonia3
- Denmark1
- Spain1
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- Collection
- SARS-CoV-2 : Studying a new virus1
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- Status
- Active14
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