Materials - RDM

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- Genome annotation202
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- Chromosome walking104
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- Galaxy368
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- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
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- CellProfiler4
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- bx-python4
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- snpEff4
- Apollo3
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- Bracken3
- Cardinal3
- Clustal 1.8 (Clustal W, Clustal X)3
- DropletUtils3
- FastTree3
- GenomeScope 2.03
- GraPhlAn3
- InterProScan (EBI)3
- OMArk3
- QualiMap3
- RDKit3
- SeqCode3
- SortMeRNA3
- Stacks3
- The Protein Data Bank (PDB)3
- UCSC Genome Browser Utilities3
- Vcflib3
- dRep3
- export2graphlan3
- gfastats3
- humann3
- iqtree3
- lofreq3
- pyGenomeTracks3
- snippy3
- Bio3D2
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- Standard database or policy
- NCBI Gene4
- HumanMine1
- Integrated resource of protein families, domains and functional sites1
- PRINTS1
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- PaN Training6705
- Glittr.org816
- GTN793
- European Bioinformatics Institute (EBI)465
- ERGA Knowledge Hub128
- GOBLET104
- Australian BioCommons84
- SIB Swiss Institute of Bioinformatics82
- Software Carpentry70
- Bioconductor44
- Khan Academy Statistics32
- Canadian Bioinformatics Workshops27
- BY-COVID25
- IFB French Institute of Bioinformatics20
- VIB Training & Conferences20
- Coding for Reproducible Research (CfRR)19
- Bioschemas9
- Data Carpentry9
- Coursera8
- eNanoMapper8
- InterMine4
- Danish National Health Data Science Sandbox3
- NanoCommons2
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- Keyword
- R340
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- hbovpk224
- Hochschuldidaktik218
- Hochschullehre193
- QUADIS172
- Transcriptomics149
- Hochschule140
- Genomics135
- Didaktik134
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- Elementar+123
- Kursmaterial122
- Next generation sequencing115
- RNA-seq113
- Workshop109
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- asynchron107
- biodiversity106
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- Barrierefreiheit102
- Data management101
- Onlinelehre101
- FAIR data94
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- Profilehreplus88
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- jupyter-notebook84
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- Educación física77
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- Verpleegkunde65
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- Single-cell sequencing59
- FAIR58
- Open educational Resources58
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- maan kasvukunto57
- Digitalisierung (Digitale Transformation, Digitaler Wandel)56
- Blended Learning55
- Data visualization54
- Jukka Rajala54
- work-in-progress54
- Foundations of Data Science52
- ProfiLehrePlus52
- E-Learning (Learning on demand, Digitales Lernen)51
- HU51
- Version control51
- Open Science50
- Studiehandleiding50
- HAN49
- Proteomics49
- Workflows49
- Steckbrief48
- Variant analysis48
- Deporte47
- luomu47
- Digitalisierung46
- Development in Galaxy45
- HSLeiden44
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- Statistics and machine learning44
- Bildung43
- Genome assembly42
- Single Cell42
- training42
- programming41
- Digitale Lehre40
- Zorgverlener40
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- Competency level
- Not specified8662
- Beginner649
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- Licence
- License Not Specified3200
- Creative Commons Attribution 4.0 International2274
- Creative Commons Attribution Share Alike 4.0 International1664
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International779
- Creative Commons Attribution Non Commercial Share Alike 4.0 International680
- Creative Commons Attribution Non Commercial 4.0 International357
- Creative Commons Attribution No Derivatives 4.0 International246
- MIT License125
- Creative Commons Zero v1.0 Universal73
- GNU General Public License v3.0 only47
- BSD 3-Clause "New" or "Revised" License16
- Apache License 2.015
- Artistic License 2.02
- GNU Affero General Public License v3.0 only2
- Do What The F*ck You Want To Public License1
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- Target audience
- Students543
- PhD students139
- Clinicians119
- Galaxy Administrators113
- Instructors52
- Novice44
- Intermediate26
- Researchers19
- Bench biologists16
- Biologists16
- Biologists, Genomicists, Computer Scientists16
- post-docs16
- beginner bioinformaticians14
- Beginners13
- beamtime users, researchers, PhD students13
- Graduate Students12
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- bioinformaticians9
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- Life Science Researchers7
- PaN Community7
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- crystallography5
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- archaeologists4
- biologists4
- material scientists4
- postgrad4
- spectroscopy4
- ExPaNDS and PaNOSC project members3
- PhD Students3
- life scientists3
- postdoc3
- research data scientist3
- Beginner2
- Chemists2
- Life Scientists2
- Materials scientists2
- PaN users2
- Physicists2
- Postgraduate students2
- Scientists2
- Undergraduate students2
- biology and bioinformatics sophomore undergraduates2
- data stewards2
- diffraction2
- imaging2
- postdocs2
- software developers, bioinformaticians2
- Anyone wants to start using the Unix/Linux OS1
- Bachelor students1
- Beginner informatics1
- Bioinformatician1
- Bioinformatics1
- Biomedical researchers1
- Clinical Scientists1
- Educators1
- High School Students1
- Lecturers1
- Life sciences1
- Life scientists, bioinformaticians and researchers who are familiar with writing Python code and core Python elements, and would like to use it in their daily data exploration and visualization tasks.1
- Master students1
- Ontologists1
- Post Docs1
- Postdoctoral researchers1
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- Training Designers1
- Training instructors1
- University and College Level Students1
- Users1
- adults1
- beginner1
- computational scientists1
- data curator1
- data managers1
- early stage phytopathogen researchers1
- engineers1
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- field biologist researchers1
- general public1
- geneticists1
- healthcare professionals1
- high school1
- master1
- medical researchers1
- paleontologists1
- plant researchers1
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- Author
- Helena Rasche128
- Bérénice Batut111
- SIB Swiss Institute of Bioinformatics111
- Saskia Hiltemann66
- The Carpentries Incubator64
- Björn Grüning49
- bioinformatics.ca35
- Simon Gladman33
- Yvan Le Bras29
- Anthony Bretaudeau28
- Anton Nekrutenko28
- Nate Coraor27
- bebatut27
- Subina Mehta26
- John Chilton25
- Nicola Soranzo25
- The Carpentries25
- bgruening25
- NBIS - National Bioinformatics Infrastructure Sweden22
- Anne Fouilloux21
- Fotis E. Psomopoulos21
- Michelle Brazas21
- posit-conf-202321
- Coding for Reproducible Research Initiative19
- Data Carpentry19
- Marie Josse19
- The Gulbenkian Training Programme in Bioinformatics19
- Wendi Bacon19
- posit::conf(2024)19
- Bazante Sanders18
- Terri Attwood18
- UC Davis Bioinformatics Core Training Page18
- Mehmet Tekman17
- Teaching materials at the Harvard Chan Bioinformatics Core17
- Paul Zierep16
- Wandrille Duchemin16
- Cristóbal Gallardo15
- Laserlab Europe15
- Martin Morgan15
- Samaha, Georgina15
- Pratik Jagtap14
- CRUK CI Bioinformatics Core13
- Dave Clements13
- Delphine Lariviere13
- Donny Vrins13
- Fred Hutch Data Science Lab13
- Maria Doyle13
- Wolfgang Maier13
- shiltemann13
- Anup Kumar12
- James Johnson12
- Katarzyna Kamieniecka12
- Katherine Do12
- Krzysztof Poterlowicz12
- Marius van den Beek12
- Melanie Föll12
- Simon Bray12
- nekrut12
- Pavankumar Videm11
- Sundeep Agarwal11
- Canadian Bioinformatics Workshops10
- Daniel Blankenberg10
- Geert van Geest10
- Julia Jakiela10
- Khaled Jum'ah10
- Martin Čech10
- Anika Erxleben9
- Avans Hogeschool9
- ELIXIR Estonia9
- Lucille Delisle9
- MolSSI Education9
- Praveen Kumar9
- allegra.via Via9
- rstudio::conf(2022)9
- Anne Pajon8
- Diana Chiang Jurado8
- Emma Leith8
- Joachim Wolff8
- Kaivan Kamali8
- Patricia Palagi8
- Sergio Martínez Cuesta8
- Stéphanie Robin8
- Timothy J. Griffin8
- Alex Ostrovsky7
- Alexandre Cormier7
- Allegra Via7
- Anna Syme7
- Beecroft, Sarah7
- Biocore@CRG7
- Bioinformatics, Rockefeller University7
- Christopher Barnett7
- Erwan Corre7
- Florian Christoph Sigloch7
- Gildas Le Corguillé7
- Jeremy Goecks7
- Junhao Qiu7
- Laura Leroi7
- Leonid Kostrykin7
- Matthias Fahrner7
- Michael Charleston7
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- Contributor
- Saskia Hiltemann589
- Helena Rasche496
- Björn Grüning429
- Bérénice Batut261
- Nicola Soranzo180
- Martin Čech129
- Anthony Bretaudeau108
- Cristóbal Gallardo104
- Niall Beard90
- Toby Hodges82
- Wendi Bacon73
- Nate Coraor70
- François Michonneau68
- Armin Dadras66
- Pavankumar Videm65
- Gildas Le Corguillé63
- Erin Becker62
- Marius van den Beek62
- William Durand59
- Zhian N. Kamvar59
- Mine Cetinkaya-Rundel56
- Simon Gladman54
- Katrin Leinweber53
- Tracy Teal53
- Raniere Silva52
- W. Trevor King51
- maneesha51
- Andy Boughton50
- Teresa Müller48
- Katie Anne Mills47
- Maxim Belkin47
- Beatriz Serrano-Solano46
- Lucille Delisle46
- Mehmet Tekman46
- Yvan Le Bras46
- Canadian Bioinformatics Workshops43
- David Pérez-Suárez43
- Gabriel A. Devenyi43
- Abby Cabunoc Mayes41
- EvanWill41
- Ian Lee41
- Jon Pipitone41
- Jonah Duckles41
- Michael Hansen41
- Piotr Banaszkiewicz41
- Brandon Curtis40
- David Mawdsley40
- Greg Wilson40
- Jemma Stachelek40
- Remi Rampin40
- Allen Lee39
- Andrew Sanchez39
- Michael R. Crusoe39
- James Allen38
- Jeff Oliver38
- Joel Nothman38
- Nick Young38
- Rémi Emonet38
- naught10138
- Marie Josse37
- Rayna M Harris37
- William L. Close37
- Wolfgang Maier36
- Melanie Föll35
- Sarah Brown35
- Anup Kumar34
- Gerard Capes33
- Maria Doyle33
- Renato Alves31
- trk30
- Ana Conrado29
- Stephan Druskat29
- Christina K.28
- K.E. Koziar28
- Subina Mehta28
- Alex Whan27
- Simon Bray27
- Anne Fouilloux26
- Paula Andrea Martinez26
- Michael Joseph25
- Anthony Gitter24
- João Rodrigues24
- Peter van Heusden24
- Donny Vrins23
- Geert van Geest23
- Robert Davey22
- Sarah Stevens22
- Tristan Reynolds21
- actions-user21
- Henry Schreiner20
- Hilmar Lapp20
- Julia Jakiela20
- Bazante Sanders19
- The Gulbenkian Training Programme in Bioinformatics19
- Anton Nekrutenko18
- Leonid Kostrykin18
- Paola Prieto18
- C. Titus Brown17
- Deepti Varshney17
- Paul Zierep17
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- Resource type
- e-learning665
- Recorded webinar301
- slides193
- Tutorial65
- tutorial48
- Course materials47
- video44
- exercise27
- hands-on tutorial27
- service22
- Video20
- Slides15
- Book7
- lessons6
- Talk5
- Lesson4
- Presentation3
- documenation3
- Poster2
- Training materials2
- jupyter notebook2
- online tutorial2
- Document1
- Documentation1
- E-Learning1
- Jupyter notebooks1
- Online tutorial1
- ViralZone1
- e-Learning1
- flashcards1
- git1
- handbook1
- presentation1
- scientific article1
- tool1
- tutorials1
- wiki1
- workflow1
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- Related resource
- Associated Training Datasets332
- Associated Workflows307
- Jupyter Notebook (with Solutions)52
- Jupyter Notebook (without Solutions)52
- Input datasets32
- Associated slides9
- 2nd PaN EOSC Symposium6
- Quarto/RMarkdown Notebook6
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- Development in Galaxy slides3
- Slides3
- ChIP-Seq data analysis dataset2
- Epigenetics dataset2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- Booklet of presentations1
- Colloquia list1
- Contributing to the Galaxy Training Material slides1
- Documentation1
- Galaxy Server administration slides1
- Genome Annotation slides1
- ICAT search API implementation1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Jupyter Notebook1
- McStas1
- Overview of the Symposium1
- Part 101
- Part 2a1
- Part 2b1
- Part 31
- Part 41
- Part 51
- Part 61
- Part 71
- Part 81
- Part 91
- Recoding1
- Reference search API implementation1
- SciCat search API implementation1
- Scientific article1
- Statistics dataset1
- TELBE workflow1
- Transcriptomics slides1
- User Interface and Features dataset1
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- Node
- Switzerland1051
- EMBL-EBI465
- Germany36
- Belgium20
- France20
- United Kingdom4
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- Collection
- ELIXIR Biodiversity Community7
- PINK project5
- ELIXIR Federated Human Data Community4
- ELIXIR Systems Biology Community: training events and materials4
- ELIXIR SIS-Containers - collection of training materials2
- ELIXIR Toxicology Community2
- ELIXIR hCNV community - collection of courses and materials.1
- VIP138 SLOT Online Terbaik saat ini di Indonesia1
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- Active133
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