Training materials
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ELIXIR TeSS
Tutorial, Training materials, Bioinformatics
How to use REPET software for de novo annotation of transposable elements in genomes
• BeginnerGenomics Structural variation Bioinformatics Genome annotation Sequence classification Transposons Annotation Pipelines Docker -
ELIXIR TeSS
Applied-Genomics-UTD/docs
Workflows ChIP-seq Epigenetics Genomics RNA-Seq Workflows Snakemake Reproducibility Unix/Linux ATAC-seq …
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ELIXIR TeSS
stephenturner/workshops
Genomics Statistics and probability Data visualisation R markdown RNA-Seq R Data visualization Rmarkdown RNA-seq Genomics …
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ELIXIR TeSS
e-learning
Genome annotation with Helixer
•• IntermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
ELIXIR TeSS
rapidspeciation/biodiversity_genomics_course
Genomics Sequencing Variant pattern analysis Genomics Next generation sequencing Variant analysis
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ELIXIR TeSS
nt246/lcwgs-guide-tutorial
Genomics Sequencing Variant pattern analysis Variant analysis Genomics Next generation sequencing
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ELIXIR TeSS
e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• BeginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology Sequence analysis bacteria illumina microgalaxy -
ELIXIR TeSS
genome/bfx-workshop
Genomics Sequencing RNA-Seq Variant pattern analysis Data visualisation Single-cell sequencing Genomics Next generation sequencing RNA-seq Variant analysis …
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ELIXIR TeSS
e-learning
Checking expected species and contamination in bacterial isolate
• BeginnerEcology Biodiversity Whole genome sequencing Genomics Microbiology Microbial ecology Ecology bacteria illumina microgalaxy -
ELIXIR TeSS
e-learning
Creating an Official Gene Set
• BeginnerGenomics Genome Annotation apollo2 gmod work-in-progress