Materials

Filter Clear filters
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
- Scientific topic
- Genome annotation163
- R152
- R program152
- R script152
- Exomes142
- Genomes142
- Genomics142
- Personal genomics142
- Synthetic genomics142
- Viral genomics142
- Whole genomes142
- Comparative transcriptomics135
- Transcriptome135
- Transcriptomics135
- Data management131
- Metadata management131
- Research data management (RDM)131
- Python126
- Python program126
- Python script126
- py126
- MicroRNA sequencing117
- RNA sequencing117
- RNA-Seq117
- RNA-Seq analysis117
- Small RNA sequencing117
- Small RNA-Seq117
- Small-Seq117
- Transcriptome profiling117
- WTSS117
- Whole transcriptome shotgun sequencing117
- miRNA-seq117
- Chromosome walking103
- Clone verification103
- DNA-Seq103
- DNase-Seq103
- High throughput sequencing103
- High-throughput sequencing103
- NGS103
- NGS data analysis103
- Next gen sequencing103
- Next generation sequencing103
- Panels103
- Primer walking103
- Sanger sequencing103
- Sequencing103
- Targeted next-generation sequencing panels103
- Active learning89
- Ensembl learning89
- Kernel methods89
- Knowledge representation89
- Machine learning89
- Neural networks89
- Recommender system89
- Reinforcement learning89
- Supervised learning89
- Unsupervised learning89
- FAIR data85
- Findable, accessible, interoperable, reusable data85
- Bayesian methods84
- Biostatistics84
- Descriptive statistics84
- Gaussian processes84
- Inferential statistics84
- Markov processes84
- Multivariate statistics84
- Probabilistic graphical model84
- Probability84
- Statistics84
- Statistics and probability84
- Single-cell genomics59
- Single-cell sequencing59
- Data rendering54
- Data visualisation54
- Metagenomics40
- Shotgun metagenomics40
- Breakend assembly38
- Genome assembly38
- Genomic assembly38
- Sequence assembly (genome assembly)38
- Protein bioinformatics37
- Protein databases37
- Protein informatics37
- Proteins37
- Variant pattern analysis37
- Pipelines36
- Software integration36
- Tool integration36
- Tool interoperability36
- Workflows36
- Antimicrobial stewardship33
- Bioinformatics33
- Functional genome annotation33
- Medical microbiology33
- Metagenome annotation33
- Microbial genetics33
- Microbial physiology33
- Microbial surveillance33
- Microbiological surveillance33
- Microbiology33
- Show N_FILTERS more
- Tool
- Bioconductor23
- REDCap19
- BridgeDb3
- MGnify (was EBI Metagenomics)3
- BridgeDbR1
- CARNIVAL1
- CDK Depict1
- CellNOptR1
- Cufflinks1
- Cytoscape1
- Data Stewardship Wizard1
- EDAM-Browser1
- Galaxy1
- HumanMine1
- MGnify1
- MouseMine1
- OMERO1
- Ontology Lookup Service1
- RCy31
- RDMkit1
- TargetMine1
- WikiPathways1
- Wikidata1
- bio.tools1
- Show N_FILTERS more
- Standard database or policy
- NCBI Gene4
- DisProt2
- BRENDA1
- BridgeDb1
- Ensembl1
- Genomics England | PanelApp1
- HumanMine1
- Integrated resource of protein families, domains and functional sites1
- Observational Medical Outcomes Partnership Standard Vocabulary1
- PRINTS1
- Stress Knowledge Map1
- The FAIR Principles1
- The Observational Medical Outcomes Partnership Common Data Model1
- WorkflowHub1
- i2b2-patient_visit_dimensions1
- Show N_FILTERS more
- Content provider
- PaN Training6676
- Glittr.org811
- European Bioinformatics Institute (EBI)490
- ERGA Knowledge Hub128
- GTN111
- GOBLET108
- Australian BioCommons91
- Software Carpentry70
- ELXIR-UK DaSH62
- ELIXIR54
- Bioconductor42
- de.NBI33
- Khan Academy Statistics32
- Canadian Bioinformatics Workshops26
- BY-COVID25
- Coding for Reproducible Research (CfRR)19
- Coursera18
- IFB French Institute of Bioinformatics13
- SIB Swiss Institute of Bioinformatics11
- VHP4Safety10
- Bioschemas9
- Data Carpentry9
- DTLS - Dutch Techcentre For Life Sciences7
- Data Steward team Ghent University6
- eNanoMapper6
- LIPID MAPS5
- VIB Training & Conferences5
- ELIXIR Slovenia4
- InterMine4
- BioData.pt3
- Bioinformatics and Biomathematics Training Hub3
- Centre for Genomic Regulation (CRG)3
- NanoCommons3
- Barcelona Supercomputing Center (BSC)2
- Department of Bioinformatics - BiGCaT, Maastricht University2
- ELIXIR Estonia2
- ELIXIR Norway2
- ELIXIR: The Czech Republic Node2
- NBIS2
- Biomedical Sciences Research Center "Alexander Fleming"1
- CSC - IT Center for Science1
- Centre for Digital Life Norway1
- Danish National Health Data Science Sandbox1
- ExCALIBUR1
- Open Science MOOC1
- PerMedCoE1
- The Carpentries1
- proteomicsML1
- Show N_FILTERS more
- Keyword
- R334
- Python230
- hbovpk224
- Hochschuldidaktik218
- Hochschullehre193
- QUADIS172
- Genomics140
- Hochschule140
- Didaktik134
- Seminar130
- Elementar+123
- Kursmaterial122
- Transcriptomics119
- Next generation sequencing115
- RNA-seq113
- Workshop109
- Vorlage107
- asynchron107
- Template104
- Barrierefreiheit103
- Data management103
- Onlinelehre101
- blended learning93
- synchron93
- FAIR data90
- Profilehreplus88
- CHE86
- Data science85
- Bioinformatics84
- digital gestützte Lehre82
- Statistics81
- OER79
- Machine learning78
- Educación física77
- Lehre77
- Entrenamiento70
- Reproducibility70
- HBOVPK65
- Verpleegkunde65
- gaming65
- Spiel (Spielen, Spiele)63
- Unix/Linux62
- Behinderung (Behinderungen)61
- FAIR59
- Single-cell sequencing59
- Open educational Resources58
- biodiversity58
- Bereich A Lehr-Lern-Konzepte57
- maan kasvukunto57
- Digitalisierung (Digitale Transformation, Digitaler Wandel)56
- Blended Learning55
- Data visualization54
- Jukka Rajala54
- ProfiLehrePlus52
- E-Learning (Learning on demand, Digitales Lernen)51
- HU51
- Studiehandleiding50
- Version control50
- HAN49
- Open Science49
- Steckbrief48
- Variant analysis48
- Deporte47
- Workflows47
- luomu47
- Digitalisierung46
- HSLeiden44
- Salud44
- Bildung43
- Genome assembly42
- RDM41
- data management41
- Digitale Lehre40
- Zorgverlener40
- luomutuotanto40
- Weiterbildung39
- avans39
- microgalaxy39
- Digitale Spiele38
- Medienpädagogik38
- workshop38
- ICF37
- work-in-progress37
- Actividad física36
- Digital gestützte Lehre36
- General36
- Genome annotation36
- Inklusion36
- tietokortit36
- Kommunikation35
- higher education35
- Wissenschaftsmanagement34
- Habitus33
- Metagenomics33
- Partizipation33
- Physik33
- Bildungsmanagement32
- Macht32
- Open Access32
- Professionelles Handeln32
- Show N_FILTERS more
- Competency level
- Not specified
- Beginner936
- Intermediate267
- Advanced45
- Show N_FILTERS more
- Licence
- License Not Specified3294
- Creative Commons Attribution Share Alike 4.0 International1683
- Creative Commons Attribution 4.0 International1648
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International786
- Creative Commons Attribution Non Commercial Share Alike 4.0 International680
- Creative Commons Attribution Non Commercial 4.0 International359
- Creative Commons Attribution No Derivatives 4.0 International246
- MIT License124
- Creative Commons Zero v1.0 Universal75
- GNU General Public License v3.0 only47
- BSD 3-Clause "New" or "Revised" License16
- Apache License 2.015
- Artistic License 2.02
- GNU Affero General Public License v3.0 only2
- Other (Not Open)2
- Creative Commons Attribution 2.0 Generic1
- Do What The F*ck You Want To Public License1
- The Unlicense1
- Show N_FILTERS more
- Target audience
- PhD students138
- Clinicians119
- Novice44
- Intermediate26
- Researchers25
- Students22
- Biologists, Genomicists, Computer Scientists19
- Life Science Researchers17
- life scientists15
- post-docs15
- Biologists14
- bioinformaticians14
- Beginners13
- Post-Doctoral Fellows13
- beamtime users, researchers, PhD students13
- Graduate Students12
- beginner bioinformaticians12
- Bench biologists11
- Trainers10
- biocurators8
- PaN Community6
- Photon Community6
- scientists6
- Life Scientists5
- PhD5
- Training Designers5
- Training instructors5
- crystallography5
- neutron community5
- General Interest4
- archaeologists4
- material scientists4
- postgrad4
- spectroscopy4
- Bioinformatician3
- Bioinformaticians3
- data stewards3
- postdoc3
- research data scientist3
- software developers, bioinformaticians3
- teachers3
- Chemists2
- ExPaNDS and PaNOSC project members2
- Master students2
- Materials scientists2
- PaN users2
- Physicists2
- Postgraduate students2
- Scientists2
- Toxicologists2
- Training Coordinators2
- Training Organisers2
- Undergraduate students2
- biology and bioinformatics sophomore undergraduates2
- diffraction2
- imaging2
- plant researchers2
- postdocs2
- Anyone interested in bioinformatics1
- Anyone wants to start using the Unix/Linux OS1
- Anyone who wants to become a good trainer or teacher1
- Bachelor students1
- Beginner informatics1
- Bioinformatics1
- Biomedical researchers1
- Clinical Scientists1
- DMP writers1
- Data Access Committeses from the EGA1
- Data Scientists1
- ELIXIR members1
- Early Career Researcher1
- Educators1
- Grad students1
- Graduate students1
- High School Students1
- Lecturers1
- Life sciences1
- Ontologists1
- PhD Students1
- PhD candidates1
- Postdoctoral researchers1
- Professors1
- Prospective and existing trainers1
- Researcher in life sciences1
- Researchers and bioinformaticians in other projects interested in depositiong data at the EGA1
- Researchers and bioinformaticians involved in the VEIS project1
- Researchers in Life Sciences1
- Scientific community1
- Structural Biologists1
- Technicians1
- The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields.1
- This webinar is aimed at scientists with an interest in learning more about the Europe PMC and optimising their literature searches.1
- This workshop is aimed at PhD students within the PhD programme "Genetics, Molecular and Cellular Biology" (University of Pavia) and the PhD programmme "Biomolecular Sciences and Biotechnology" (IUSS, University School for Advanced Studies Pavia.1
- University and College Level Students1
- Users1
- Wet-lab researchers and bioinformaticians who want to access scientific literature and data programmatically.1
- clinicians and informaticians interested in cancer genetics1
- computational scientists1
- data managers1
- early stage phytopathogen researchers1
- Show N_FILTERS more
- Author
- The Carpentries Incubator64
- SIB Swiss Institute of Bioinformatics46
- bioinformatics.ca35
- bebatut27
- bgruening25
- NBIS - National Bioinformatics Infrastructure Sweden22
- Michelle Brazas21
- posit-conf-202321
- Coding for Reproducible Research Initiative19
- Data Carpentry19
- Saskia Lawson-Tovey19
- The Gulbenkian Training Programme in Bioinformatics19
- posit::conf(2024)19
- Terri Attwood18
- UC Davis Bioinformatics Core Training Page18
- Teaching materials at the Harvard Chan Bioinformatics Core17
- Laserlab Europe15
- Martin Morgan15
- Samaha, Georgina15
- CRUK CI Bioinformatics Core13
- Fred Hutch Data Science Lab13
- shiltemann13
- nekrut12
- Laura Cooper11
- Sundeep Agarwal11
- Canadian Bioinformatics Workshops10
- Paul Yorke10
- Bérénice Batut9
- ELIXIR Estonia9
- MolSSI Education9
- allegra.via Via9
- rstudio::conf(2022)9
- Egon Willighagen8
- Sergio Martínez Cuesta8
- Beecroft, Sarah7
- Biocore@CRG7
- Bioinformatics, Rockefeller University7
- Maria Levchenko7
- Saskia Hiltemann7
- Software Carpentry7
- Williams, Sarah7
- pajanne7
- stortebecker7
- Andrew Mason6
- BU-ISCIII6
- Deshpande, Nandan6
- VIB Training & Conferences6
- erxleben6
- joachimwolff6
- Aidan Budd5
- Barugahare, Adele5
- Dayane Araujo5
- ELIXIR Europe Training5
- Emma Karoune5
- Goudey, Benjamin5
- Gustafsson, Johan5
- Hadley Wickham5
- Manuel Corpas5
- Patricia Palagi5
- Rami Krispin5
- The Carpentries Lab5
- Waldron Lab at the CUNY SPH5
- Willet, Cali5
- blankclemens5
- cambiotraining5
- erasche5
- jhudsl5
- nsoranzo5
- posit-dev5
- slugger705
- Alex's Lemonade Stand Foundation4
- Allen Downey4
- András Aszódi4
- BioNT Training4
- Boas Pucker4
- Computational Biology and Bioinformatics at UCLouvain4
- Geaghan, Michael4
- Hall, Grace4
- Health Data Science Sandbox4
- Helena Rasche4
- Institut Français de Bioinformatique (IFB)4
- Jake Vanderplas4
- Jaya, Frederick4
- Morgan, Steven4
- Nelson, Tiffanie4
- Price, Gareth4
- RStudio4
- Ted Laderas4
- VIB Technologies: Training material and software projects4
- coderefinery4
- malloryfreeberg4
- tnabtaf4
- yvanlebras4
- Allegra Via3
- Björn Grüning3
- Bruno Gaeta3
- C. Li3
- Celia van Gelder3
- Chew, Tracy3
- Christine Staiger3
- Show N_FILTERS more
- Contributor
- Toby Hodges81
- François Michonneau68
- Erin Becker62
- Zhian N. Kamvar59
- Mine Cetinkaya-Rundel56
- Katrin Leinweber53
- Tracy Teal53
- Raniere Silva52
- W. Trevor King51
- maneesha51
- Andy Boughton50
- Robert Andrews50
- Katie Anne Mills47
- Maxim Belkin47
- Canadian Bioinformatics Workshops43
- David Pérez-Suárez43
- Gabriel A. Devenyi43
- Abby Cabunoc Mayes41
- EvanWill41
- Ian Lee41
- Jon Pipitone41
- Jonah Duckles41
- Michael Hansen41
- Piotr Banaszkiewicz41
- Brandon Curtis40
- David Mawdsley40
- Greg Wilson40
- Jemma Stachelek40
- Remi Rampin40
- Allen Lee39
- Andrew Sanchez39
- Michael R. Crusoe39
- James Allen38
- Jeff Oliver38
- Joel Nothman38
- Munazah Andrabi38
- Nick Young38
- Rémi Emonet38
- naught10138
- Rayna M Harris37
- William L. Close37
- Sarah Brown35
- Gerard Capes33
- Renato Alves30
- trk30
- Ana Conrado29
- Stephan Druskat29
- Christina K.28
- K.E. Koziar28
- Alex Whan27
- Paula Andrea Martinez26
- Michael Joseph25
- Anthony Gitter24
- João Rodrigues24
- Geert van Geest23
- Robert Davey22
- Sarah Stevens22
- actions-user21
- Henry Schreiner20
- Hilmar Lapp20
- The Gulbenkian Training Programme in Bioinformatics19
- Paola Prieto18
- C. Titus Brown17
- Aaron O'Leary16
- Annajiat Alim Rasel16
- Benson Muite16
- Bérénice Batut16
- Will Gammerdinger16
- Hannah Lyman15
- Mark Fernandes15
- Meeta Mistry15
- Radhika Khetani15
- Trevor Bekolay15
- Bianca Peterson14
- Candace Savonen14
- John Blischak14
- Carrie Wright13
- Karen Word13
- Lex Nederbragt13
- Mateusz Kuzak13
- Wolmar Nyberg Åkerström13
- jhudsl-robot13
- zhibinlu13
- Andrew Reid12
- Ethan White12
- JCSzamosi12
- Laurent Gatto12
- Stéphane Guillou12
- The Carpentries Incubator12
- Ariel Rokem11
- Hugo Tavares11
- Ivan Gonzalez11
- Jihe Liu11
- Karen Cranston11
- Kate Isaac11
- Kilian Lieret11
- Miguel Cardoso11
- Niclas Jareborg11
- Pete11
- Radovan Bast11
- Show N_FILTERS more
- Resource type
- Recorded webinar306
- Video143
- e-learning122
- Tutorial83
- Webinar82
- video74
- Course materials49
- slides49
- tutorial46
- Slides29
- exercise26
- service20
- Presentation16
- Training materials11
- hands-on tutorial9
- Book8
- course materials7
- Talk5
- lessons4
- Lesson3
- PDF3
- documenation3
- Documentation2
- How-to guide2
- Life Sciences Literature Database2
- Poster2
- Scripts2
- Slidedeck2
- handbook2
- jupyter notebook2
- presentation2
- E-Learning1
- E-learning + workshop1
- Notes1
- Online tutorial1
- Tool1
- additional reading1
- case studies1
- didactic activities1
- e-Learning1
- flashcards1
- git1
- implementation guidelines1
- knowledgebase1
- online modules1
- podcast1
- scientific article1
- tool1
- tutorials1
- wiki1
- workflow1
- Show N_FILTERS more
- Related resource
- Input datasets32
- Research Data Management in Life Sciences11
- Associated slides9
- 2nd PaN EOSC Symposium6
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- Development in Galaxy slides3
- ChIP-Seq data analysis dataset2
- Epigenetics dataset2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- Slides2
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Booklet of presentations1
- COBRA Toolbox1
- Colloquia list1
- Contributing to the Galaxy Training Material slides1
- DMPortal1
- Data Stewardship Wizard1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Documentation1
- EGA Submitter Portal Tutorial1
- ELIXIR's Impact Toolkit1
- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Galaxy Server administration slides1
- Genome Annotation slides1
- Genomics England PanelApp1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Introduction to the EGA and sharing sensitive data1
- Jupyter Notebook1
- McStas1
- Overview of the Symposium1
- Part 101
- Part 2a1
- Part 2b1
- Part 31
- Part 41
- Part 51
- Part 61
- Part 71
- Part 81
- Part 91
- Scientific article1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- Statistics dataset1
- TELBE workflow1
- Transcriptomics slides1
- User Interface and Features dataset1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
- elabFTW1
- Show N_FILTERS more
- Node
- Switzerland976
- EMBL-EBI491
- United Kingdom76
- Germany69
- Netherlands25
- Czech Republic17
- France13
- Belgium12
- Slovenia6
- Spain5
- Sweden4
- Finland3
- Italy3
- Norway3
- Portugal3
- Estonia2
- Luxembourg2
- Greece1
- Show N_FILTERS more
- Collection
- PHENotyping and EnviroTyping (PHENET training collection)19
- RDMbites: REDCap18
- RDMbites: Image data11
- RDMbites: Sequencing data9
- RDMbites: Data management essentials8
- ELIXIR Federated Human Data Community6
- PINK project6
- ELIXIR Biodiversity Community5
- ELIXIR Systems Biology Community: training events and materials5
- ELIXIR Toxicology Community5
- RDMbites: Sensitive data5
- ELIXIR SIS-Containers - collection of training materials4
- RDMbites: Equality, Diversity, Inclusion and Justice in RDM4
- VEIS - Value of the EGA for Industry and Society3
- Elements of Data Management2
- EuroBioC20262
- CSAMA 20261
- Impact of research infrastructures1
- VIP138 SLOT Online Terbaik saat ini di Indonesia1
- Show N_FILTERS more
- Status
- Active151
- Under development3
- Show N_FILTERS more
Only show materials from current space
Show disabled materials
Show materials with broken links
Show archived materials

Training materials

Across all spaces: true

and Competency level: Not specified

8982 materials found

Results per page:

PaN Training

Mapping

basics
PaN Training

Clean and manage Sanger sequences from raw files to aligned consensus
PaN Training

Primer and primer scheme design for pan-specific detection and sequencing of viral pathogens across genotypes

virology
PaN Training

Neoantigen 4: Variant Annotation

label-free neoantigen
PaN Training

Biomarker candidate identification

DDA human post-process
PaN Training

MaxQuant and MSstats for the analysis of label-free data

id-quant label-free
PaN Training

Neoantigen 3: PepQuery2 Verification

label-free neoantigen
PaN Training

Annotating a protein list identified by LC-MS/MS experiments

DDA human post-process
PaN Training

DIA Analysis using OpenSwathWorkflow

DIA id-quant
PaN Training

EncyclopeDIA

DIA id-quant

Filter

Sort

Filter Clear filters

Training materials

Mapping

Clean and manage Sanger sequences from raw files to aligned consensus

Primer and primer scheme design for pan-specific detection and sequencing of viral pathogens across genotypes

Neoantigen 4: Variant Annotation

Biomarker candidate identification

MaxQuant and MSstats for the analysis of label-free data

Neoantigen 3: PepQuery2 Verification

Annotating a protein list identified by LC-MS/MS experiments

DIA Analysis using OpenSwathWorkflow

EncyclopeDIA