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and Content provider: PerMedCoE

12 materials found

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ELIXIR TeSS

Tutorial

Tutorial on using existing PerMedCoE Building Blocks and workflows

•• Intermediate
Bioinformatics Workflows Personalised medicine Building blocks
ELIXIR TeSS

Learning pathway

Version control with Git

•• Intermediate
Software engineering Open science Version control
ELIXIR TeSS

Tutorial

From transcriptomics to mechanistic models of signalling

Gene expression Transcription factors and regulatory sites Signaling networks
ELIXIR TeSS

Tutorial, Presentation

Materials from 'Introduction to High Performance Computing for Life Scientists' course

•• Intermediate
Computational biology HPC GPU parallel computing
ELIXIR TeSS

Learning pathway

Linux learning pathways

• Beginner
Bioinformatics Linux Programming
ELIXIR TeSS

Online material, Recording, hands-on tutorial

MaBoSS: a tool for modelling biological systems

• Beginner
Mathematical modelling cancer Signalling boolean modelling logical modelling
ELIXIR TeSS

Tutorial

Tutorial on developing Building Blocks

•• Intermediate
Bioinformatics Workflows Personalised medicine HPC building blocks
ELIXIR TeSS

Tutorial

Tutorial on working with computing clusters

•• Intermediate
HPC
ELIXIR TeSS

Tutorial

Tutorial on using MPI with containers

•• Intermediate
MPI Containers Computer Programming Documentation and help
ELIXIR TeSS

Tutorial

Tutorial on CARNIVAL

•• Intermediate
Molecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics

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Training materials

Tutorial on using existing PerMedCoE Building Blocks and workflows

Version control with Git

From transcriptomics to mechanistic models of signalling

Materials from 'Introduction to High Performance Computing for Life Scientists' course

Linux learning pathways

MaBoSS: a tool for modelling biological systems

Tutorial on developing Building Blocks

Tutorial on working with computing clusters

Tutorial on using MPI with containers

Tutorial on CARNIVAL